I was reading in Adeel Khan's ''A Modern Introduction to Algebraic Stacks'' and came across the definition of the stabilizer of an $R$-valued point $x$ of a stack $X$. My question will be about that the definition does not quite make intuitive sense to me, but let me first make some definitions. The eventual questions are bold-faced.
I look at stacks as $(2,1)$-sheaves $\mathrm{Sch}^\mathrm{op}_\mathrm{fppf}\to\mathsf{Grpd}$ in the fppf-topology, where $\mathsf{Grpd}$ is the $(2,1)$-category of groupoids. Then, given an $R$-valued point $x\colon\mathrm{Spec}\,R\to X$ in $X(R)$, we define the stabilizer of $x$ in $X$ as the pullback (in the $(2,1)$-category of stacks) $\require{AMScd}$ \begin{CD} {\mathrm{St}_X(x)} @>>> {\mathrm{Spec}\,R}\\ @V V V @VV x V\\ {\mathrm{Spec}\,R} @>>x> X \end{CD} We can also define the intertia stack $\mathcal{I}_X$ of $X$ by the pullback $\require{AMScd}$ \begin{CD} {\mathcal{I}_X} @>>> X\\ @V V V @VV \Delta V\\ X @>>\Delta> X\times X \end{CD} where $\Delta\colon X\to X\times X$ is the diagonal.
Because $\mathrm{Spec}\,R$ is a set-valued stack, I can find that for any ring $R'$, the groupoid $\mathrm{St}_X(x)(R')$ is actually the set of triples $(y,z,\varphi)$ with $y,z\colon R\to R'$ maps of rings, and $\varphi\colon x|_y\to x|_z$ an isomorphism in $X(R')$.
Now comes my question: why do we call this a stabilizer of $x$ in $X$? I would expect that a stabilizer consists of all the automorphisms of $x$, in some sense. More precisely, I would expect the $R'$-valued points of the stabilizer to consist precisely of a groupoid with objects $x|_y$ for all $y\colon R\to R'$, and morphisms the automorphisms of these $x|_y$ in $X(R')$. This is not what $\mathrm{St}_X(x)$ does: we get not only automorphisms, but just general isomorphisms between different restrictions of $x$, and we only have a set, and not a groupoid. All in all, it seems like it is not completely resembling a stabilizer. Does anyone have an explanation why this is then the correct notion of the stabilizer of $x$? Why do we want to look at isomorphisms between different restrictions of $x$?
When I compute the $R'$-valued points of $\mathcal{I}_X$, I find that $\mathcal{I}_X(R')$ is equivalent to a groupoid consisting of objects $(y,\alpha)$, with $y\in X(R')$ and $\alpha\colon y\to y$ a morphism in $X(R')$. The morphisms $(y,\alpha)\to(y',\alpha')$ in this groupoid are morphisms $\zeta\colon y\to y'$ in $X(R')$ such that $\alpha=\zeta^{-1}\alpha'\zeta$. So $\mathcal{I}_X(R')$ has the automorphisms of $R'$-valued points of $X$ as objects, and their conjugations as morphisms. This seems much closer to what I would want from a stabilizer, but this is of course not the stabilizer of a single point.
We can remedy this by defining for $x\colon\mathrm{Spec}\,R\to X$ a stack $F_x$ by a pullback $\require{AMScd}$ \begin{CD} {F_x} @>>> {\mathcal{I}_X}\\ @V V V @VV \pi V\\ {\mathrm{Spec}\,R} @>>x> X \end{CD} where $\pi\colon\mathcal{I}_X\to X$ maps an object $(y,\alpha)$ to $y$ and a morphism $\zeta\colon(y,\alpha)\to(y',\alpha')$ to $\zeta\colon y\to y'$.
I can show that for a ring $R'$ the groupoid $F_x(R')$ is actually equivalent to the set consisting of pairs $(y,\omega)$, for $y\colon R\to R'$ and $\omega\colon x|_y\to x|_y$ in $X(R')$. In other words, $F_x$ collects all automorphisms of restrictions of $x$ to $R'$ into a set, but forgets about the conjugations (which is not weird, given its definition). Now, this seems more like a stabilizer to me than $\mathrm{St}_X(x)$, where we also allow isomorphisms between different restrictions of $x$. Why is this not the definition of the stabilizer of $x$?
As an aside, via the definition of $\mathrm{St}_X(x)$ we have a pullback $\require{AMScd}$ \begin{CD} {\mathrm{St}_X(x)} @>>> {\mathrm{Spec}\,R}\\ @V V V @VV (x,\mathrm{id}_x) V\\ {F_x} @>>> {\mathcal{I}_X} \end{CD} So we can recover $\mathrm{St}_X(x)$ from $F_x$ by ''further restriction'' along the identity automorphism of $x$. Because this is a $(2,1)$-pullback, it is of course not purely a restriction, but it seems still like $F_x$ is a slightly more powerful stack.