TL;DR I think the source of your confusion is seeing $X$ and $Y$ as being both the identity random variable in $(\Omega, \mathscr{F},\mathbb P)$.
I'm going to give an example of explicit exponential and uniform distributions in the same probability space in $(\Omega, \mathscr{F},\mathbb P)$.
Consider a random variable $X$ in $((0,1), \mathcal{B}(0,1), Leb)$ given by
$$X(\omega):=\frac{1}{\lambda} \ln \frac{1}{1-\omega}, \lambda > 0$$
It has cdf $F_X(x) = P(X \le x) = (1-e^{-\lambda x})1_{(0,\infty)}$, which we know to be the cdf of an exponentially distributed random variable. (*)
Actually,
$$X(1-\omega):=\frac{1}{\lambda} \ln \frac{1}{\omega}, \lambda > 0$$
also has cdf $F_X(x) = P(X \le x) = (1-e^{-\lambda x})1_{(0,\infty)}$.
Are all cdfs in this mysterious probability space exponential? No!
Now consider the identity random variable $U$ in $((0,1), \mathcal{B}(0,1), Leb)$:
$$U(\omega):=\omega$$
It has cdf $F_U(u) = P(U \le u) = u1_{(0,1)}+1_{(1,\infty)}$, which we know to be the cdf of a uniformly distributed random variable.
The above $X$ and $U$ have different CDFs under the same probability space. The aforementioned explicit representations of the exponential and uniform distributions in this probability space are called Skorokhod representations in $((0,1), \mathcal{B}(0,1), Leb)$.
Now consider the identity random variable $U$ in $(\mathbb R, \mathscr B(\mathbb R), (1-e^{-\lambda \{u\}})1_{(0,\infty)})$
No surprise that $U$ is exponential by definition: $F_U(u) = P(U \le u) = (1-e^{-\lambda \{u\}})1_{(0,\infty)}$.
Now you're wondering: Aha! So every random variable here is exponential right? Well no, for any distribution you can think of, say, uniform, Bernoulli, etc, all have a place here and their Skorokhod representaion is given by:
$$Y(\omega) = \sup(y \in \mathbb{R}: F(y) < \omega)$$
Try for yourself to see for yourself that
$$Y(\omega) = \sup(y \in \mathbb{R}: y1_{(0,1)}+1_{(1,\infty)} < \omega)$$
has uniform distribution in $(\mathbb R, \mathscr B(\mathbb R), (1-e^{-\lambda \{u\}})1_{(0,\infty)})$, i.e. $$P(Y \le y) := P(\sup(y \in \mathbb{R}: y1_{(0,1)}+1_{(1,\infty)} < \omega) \le y) = y1_{(0,1)}+1_{(1,\infty)}$$
Also try to see for yourself that $X(\omega)$ above no longer has exponential distribution in this probability space. (**)
Conclusion: I think the source of your confusion is seeing $X$ and $Y$ as being both the identity random variable in $(\Omega, \mathscr{F},\mathbb P)$. If you were to see them explicitly, you would know that they definitely don't necessarily have the same distribution.
What $\mathbb P$ does is tell you the probabilities of $\omega$'s. So you know how likely the sample point $$0.5 \in \Omega = (0,1)$$ is but not directly how likely the random variable $X$ is equal to a number in its domain such as the real number $$X(0.5) = \frac{1}{\lambda} \ln \frac{1}{1-0.5} \in \mathbb R$$ is. (*) Of course, the probability that $X$ is the real number $X(0.5)$ is
dependent on the probability that the sample point $0.5$ because $0.5=1-e^{-\lambda X(0.5)}$
not expected to be the same in another probability space, assuming of course that $X$ is in the new probability space, because it now depends on the probability of the sample point/s $X^{-1}(X(0.5))$ aka $X \in \{X(0.5)\}$. (**)
Pf of (*):
Two steps in computing $P(X \le x)$:
Find all $\omega \in \Omega = (0,1)$ s.t. $X(\omega) \le x$
Compute the probability of all those $\omega$'s.
For $x \le 0$, $P(X\leq x) = P(X \in \emptyset^{\mathbb R}) = P(\emptyset^{\Omega}) = 0$
For $x > 0$, $X(\omega) \le x$
Step 1:
$$ \iff \frac1{\lambda}\ln(\frac{1}{1-\omega}) \le x$$
$$ \iff \omega \le \frac{e^{\lambda x} - 1}{e^{\lambda x}}$$
$$ \iff \omega \in (0,1) \cap (-\infty,\frac{e^{\lambda x} - 1}{e^{\lambda x}})$$
$$ \iff \omega \in (0,\frac{e^{\lambda x} - 1}{e^{\lambda x}})$$
Step 2:
$$Leb(\omega | \omega \in (0,\frac{e^{\lambda x} - 1}{e^{\lambda x}}))$$
$$= Leb((0,\frac{e^{\lambda x} - 1}{e^{\lambda x}}))$$
$$= \frac{e^{\lambda x} - 1}{e^{\lambda x}}$$
QED
Pf of (**):
Actually $X \notin (\mathbb R, \mathscr B(\mathbb R), (1-e^{-\lambda \{u\}})1_{(0,\infty)})$ because we need $\frac{1}{1-\omega} > 0 \iff \omega < 1$.
QED
Same for $X(1-\omega)$ where we need $\frac{1}{\omega} > 0 \iff \omega > 0$.
But we can can further try to show $X$ is not exponential in $((-\infty,1), \mathscr B((-\infty,1)), (1-e^{-\lambda \{u\}})1_{(0,\infty)})$
Pf:
For $x \le 0$, $P(X\leq x) = P(X \in \emptyset^{\mathbb R}) = P(\emptyset^{\Omega}) = 0$
For $x > 0$, $X(\omega) \le x$
Step 1:
$$ \iff \frac1{\lambda}\ln(\frac{1}{1-\omega}) \le x$$
$$ \iff \omega \le \frac{e^{\lambda x} - 1}{e^{\lambda x}}$$
$$ \iff \omega \in (-\infty,1) \cap (-\infty,\frac{e^{\lambda x} - 1}{e^{\lambda x}})$$
$$ \iff \omega \in (-\infty,\min\{1,\frac{e^{\lambda x} - 1}{e^{\lambda x}}\})$$
Step 2:
$$P(\omega | X(\omega) \le x)$$
$$ = P(\omega | \omega \in (-\infty,\min\{1,\frac{e^{\lambda x} - 1}{e^{\lambda x}}\}))$$
$$= \int_{-\infty}^{\min\{1,\frac{e^{\lambda x} - 1}{e^{\lambda x}})\} d((1-e^{-\lambda \{u\}})1_{(0,\infty)})$$
$$\int_{-\infty}^{\min\{1,\frac{e^{\lambda x} - 1}{e^{\lambda x}})\} \lambda e^{-\lambda u}$$
$$1-e^{-\lambda \min\{1,1-e^{-\lambda t}\}}$$
Doesn't look exponential to me.
QED