It looks like you're seeking to show that, for every non-cyclic permutation $\pi$ that there exists $A_1,A_2,\ldots,A_n$ so that $$\operatorname{tr}(A_1A_2\ldots A_n)\neq \operatorname{tr}(A_{\pi(1)}A_{\pi(2)}\ldots A_{\pi(n)}).$$
Now, consider that a permutation is cyclic if and only if $\pi(x+1)=\pi(x)+1$ (taken mod $n$, of course). In particular, we may assume there is some $x$ such that $\pi^{-1}(x+1)\neq \pi^{-1}(x)+1$. Let $y=\pi(\pi^{-1}(x)+1)$. If we cycle the left-hand expression to put $A_x$ at the start, we get the equivalent (where we consider $A_{n+1}$ to refer to $A_1$ and so on)
$$\operatorname{tr}(A_xA_{x+1}\ldots A_y \ldots A_{x+n})$$
then, setting $A_x = M_1$ and $A_{x+1}=M_2$ and $A_{y}=M_3$ and the rest to the identity yields
$$\operatorname{tr}(M_1M_2M_3)$$
on the left. On the right hand side, we can cycle until $A_{x}$ is the first entry again
$$\operatorname{tr}(A_xA_{y}\ldots A_{x+1}\ldots A_{\pi(\pi^{-1}(x)+n)})$$
which, with the extraneous entries set to the identity as before yields
$$\operatorname{tr}(M_1M_3M_2)$$
meaning all you need to do is supply an example where
$$\operatorname{tr}(M_1M_2M_3)\neq \operatorname{tr}(M_1M_3M_2)$$
to prove the claim. Put intuitively, the trick here is to, for any non-cyclic permutation, find three elements that are put out of order by the permutation.